Skip to contents

Prepare Single PfPR Indicator for MBG

Source: R/indicator_pfpr.R
prep_pfpr_mbg.Rd

Simplified function to prepare a single PfPR indicator for MBG. Returns a single data.table rather than a list.

Usage

prep_pfpr_mbg(
  dhs_pr,
  gps_data,
  indicator = "pfpr_rdt_u5",
  age_min = 6,
  age_max = 59,
  survey_vars = list(cluster = "hv001", age = "hc1", present = "hv103", mother = "hv042",
    rdt = "hml35", mic = "hml32"),
  gps_vars = list(cluster = "DHSCLUST", lat = "LATNUM", lon = "LONGNUM")
)

Arguments

dhs_pr

DHS Person Records dataset (data.frame or tibble).

gps_data

DHS GPS dataset with cluster coordinates.

indicator

Single indicator code (e.g., "pfpr_rdt_u5"). Also accepts legacy test_type values ("rdt", "mic") combined with age_min/age_max.

age_min

Minimum age in months (inclusive). Default: 6. Only used when indicator is a legacy test_type name.

age_max

Maximum age in months (inclusive). Default: 59. Only used when indicator is a legacy test_type name.

survey_vars

Named list mapping DHS variable names. Required keys:

  • cluster: Cluster ID (default: "hv001")

  • age: Age in months (default: "hc1")

  • present: Present in household (default: "hv103")

  • mother: Mother listed in household (default: "hv042")

  • rdt: RDT result variable (default: "hml35")

  • mic: Microscopy result variable (default: "hml32")

gps_vars

Named list for GPS variable mapping.

Value

A tibble with columns: cluster_id, indicator, samplesize, x, y