Time in the simulations
Implementation in MultiMalModPy
🔍 For a detailed overview of how each model handles time, refer to the
Time
description under malaria models.
In MultiMalModPy, the user can specify the following time related parameters:
- start_year
- end_year
- emod_burnin
malariasimulation_burnin
, openmalaria_burnin
- openmalaria_survey_step
Example from setup_sim.py:
start_year = 2000
end_year = 2005
emod_burnin = 110
malariasimulation_burnin = 100
openmalaria_survey_step = '5d'
From those values, the burnin period is calculated automatically.
EMOD allows to serialize simulations after the burnin period and before the monitoring period, as described in model_specificities.
NOTE:
In OpenMalaria, surveys track events since the last survey and capture the current state at the survey’s start (e.g., the number of patent hosts).
- The minimum survey interval is 5 days.
- Only one survey interval can be specified per scenario.